The detailed information of tRNA gene sequence


Sequence ID>A171000863
Genome IDCP001696
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus fervens AG86 [CP001696]
Start position on genome 1100228
End posion on genome 1100304
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ttatggttgt
tRNA gene sequence 
GGGCTCGTGGTCTAGATGGCTATGATGCCGCCCTGACACGGCGGTGGTCGGGAGTTCGAA
TCTCCCCGAGCCCACCA
Downstream region at tRNA end position 
tttattttta
Secondary structure (Cloverleaf model)
>A171000863	Val	GAC
                   t      ACCA tttattttta
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C C C T C     A
      A G A        G      | | | | |     G
    T       T C T G       G G G A G     C
    G         | | +                 T T
    G       T G A T
      C T A        G     TGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.-

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