The detailed information of tRNA gene sequence


Sequence ID>A171000865
Genome IDCP001696
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus fervens AG86 [CP001696]
Start position on genome 1274367
End posion on genome 1274442
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cttattgatt
tRNA gene sequence 
GGGCTCGTGGTCTAGTGGCTATGATGCCGCCCTCACAAGGCGGTGGTCGCGGGTTCGAAT
CCCGCCGAGCCCACCA
Downstream region at tRNA end position 
aatatttacc
Secondary structure (Cloverleaf model)
>A171000865	Val	CAC
                   t      ACCA aatatttacc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       T C T G       G C G G G     C
    G         | | +                 T T
    C       T G A T
      T A          G     TGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.-

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