The detailed information of tRNA gene sequence


Sequence ID>A171000874
Genome IDCP001696
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus fervens AG86 [CP001696]
Start position on genome 876051
End posion on genome 875975
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tatggaaagt
tRNA gene sequence 
GCCTCGGTAGCTCAGCCTGGCGGAGCGCCTGCTTGGTAAGCAGGAGGTCGCGGGTTCAAA
CCCCGCCCGAGGCTCCA
Downstream region at tRNA end position 
tttgaaactt
Secondary structure (Cloverleaf model)
>A171000874	Thr	GGT
                   t      TCCA tttgaaactt
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          C A
                    T     C G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       G C G G G     C
    T       | | | |                 T T
    G       G A G C
      G C G        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.-

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