The detailed information of tRNA gene sequence


Sequence ID>A171000876
Genome IDCP001696
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus fervens AG86 [CP001696]
Start position on genome 825011
End posion on genome 824934
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttttataatT
tRNA gene sequence 
GCTCCGGTGGTGTAGTCCGGCCAATCATGCGGGCCTTTCGAGCCCGCGACCCGGGTTCAA
ATCCCGGCCGGAGCATCa
Downstream region at tRNA end position 
ctccatttta
Secondary structure (Cloverleaf model)
>A171000876	Glu	TTC
                   T      ATCa ctccatttta
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C T G A        G      | | | | |     A
  C         T G T G       C C G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        G     CGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.-

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