The detailed information of tRNA gene sequence


Sequence ID>A171000929
Genome IDCP001719
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobrevibacter ruminantium M1 [CP001719]
Start position on genome 1064775
End posion on genome 1064859
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcatttgtat
tRNA gene sequence 
GTCGGGATGGCCCAGCCTGGTACGGCGTCGGACTGCTAATCCGATGATCAATAGATCGCC
GGGGTTCAAATCCCCGTCCCGGCGCtt
Downstream region at tRNA end position 
tttcaatttt
Secondary structure (Cloverleaf model)
>A171000929	Ser	GCT
                   t      GCtt tttcaatttt
                     G - C
                     T + G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G C C C C     A
      C G A        G      | | | | |     A
    C       C C C G       C G G G G     C
    T         | | |                 T T
    G       C G G C
      G T A        G     TGATCAATAGATCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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