The detailed information of tRNA gene sequence


Sequence ID>A171000963
Genome IDCP001719
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobrevibacter ruminantium M1 [CP001719]
Start position on genome 361915
End posion on genome 361843
Amino Acid Pseudo
Anticodon GTT
Upstream region at tRNA start position 
agcttaaatc
tRNA gene sequence 
GGTTCTATAGTTTAACAGGTAAAACAACTGGCTGTTAACCGGCAGATAGGAGTTCGAATC
TTCTTAGAACCGCtt
Downstream region at tRNA end position 
aagatattaa
Secondary structure (Cloverleaf model)
>A171000963	Pseudo	GTT
                   c      GCtt aagatattaa
                     G - C
                     G - C
                     T - A
                     T - A
                     C - G
                     T - A
                     A - T          T A
                    T     T C T T C     A
      C A A        A      | | + | |     G
    A       T T T G       A G G A G     C
    G       | | | |                 T T
    G       A A A C
      T A          A     AGAT
                    A   C
                    C - G
                    T + G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.-

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