The detailed information of tRNA gene sequence


Sequence ID>A171000965
Genome IDCP001719
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobrevibacter ruminantium M1 [CP001719]
Start position on genome 361597
End posion on genome 361512
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcactaaacT
tRNA gene sequence 
GGCGTGGTGGCCTAGCTCGGTAGGGCGGAGGGCTGCTAATCCTCTGCGATAAAACGCTCA
TGGGTTCAAATCCCATCCACGCCGTta
Downstream region at tRNA end position 
gaaaaacaac
Secondary structure (Cloverleaf model)
>A171000965	Ser	GCT
                   T      GTta gaaaaacaac
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     T A C C C     A
      C G A        G      | | | | |     A
    T       T C C G       A T G G G     C
    C       + | | |                 T T
    G       G G G C
      G T A        G     TGCGATAAAACGCTC
                    G - C
                    A - T
                    G - C
                    G - C
                    G + T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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