The detailed information of tRNA gene sequence


Sequence ID>A171000972
Genome IDCP001719
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanobrevibacter ruminantium M1 [CP001719]
Start position on genome 360730
End posion on genome 360659
Amino Acid Pseudo
Anticodon CCA
Upstream region at tRNA start position 
tttaaaaaaa
tRNA gene sequence 
GAAGATATAGTTTAACGGCAAGAATGCTTGGCTCCAGACCAAGAGATGAGAGTTCGAATC
TTTCTATCTTCAttt
Downstream region at tRNA end position 
aaatctttaa
Secondary structure (Cloverleaf model)
>A171000972	Pseudo	CCA
                   a      Attt aaatctttaa
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     C T T T C     A
      C A A        A      | | + | |     G
    G       T T T G       G A G A G     C
    G       + | | +                 T T
    C       G A A T
      A A          G     AGAT
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       G
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.-

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