The detailed information of tRNA gene sequence


Sequence ID>A171001005
Genome IDCP001787
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus vulcanius M7 [CP001787]
Start position on genome 388940
End posion on genome 389014
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gataggttga
tRNA gene sequence 
AGGGCGGTGGCTCAGCCTGGTTAGAGTGCTCGGCTGATAACCGAGTGGTCCGGGGTTCGA
ATCCCCGCCGCCCTAtca
Downstream region at tRNA end position 
tagttttctg
Secondary structure (Cloverleaf model)
>A171001005	Ile	GAT
                   a      Atca tagttttctg
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G C C C C     A
    C C G A        G      | | | | |     G
  T         C T C G       C G G G G     C
  G         | | | +                 T T
  G         G A G T
    T T A          G     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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