The detailed information of tRNA gene sequence


Sequence ID>A171001025
Genome IDCP001787
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus vulcanius M7 [CP001787]
Start position on genome 1575671
End posion on genome 1575596
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ctaattttga
tRNA gene sequence 
GCCCCCATAGCTCAGCTGGTAGAGCGACGGACTGTTAATCCGTAGGTCGCAGGTTCGAGT
CCTGCTGGGGGCGCCA
Downstream region at tRNA end position 
tcattttttt
Secondary structure (Cloverleaf model)
>A171001025	Asn	GTT
                   a      GCCA tcattttttt
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     C G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.-

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