The detailed information of tRNA gene sequence


Sequence ID>A171001034
Genome IDCP001787
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus vulcanius M7 [CP001787]
Start position on genome 332498
End posion on genome 332424
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ctatgcaaga
tRNA gene sequence 
GCCGGGGTAGTCTAGAGGCTAGGCAGCGGACTGCAGATCCGCTTTACGTGGGTTCAAATC
CCACCCCCGGCTCCA
Downstream region at tRNA end position 
tttgaattca
Secondary structure (Cloverleaf model)
>A171001034	Cys	GCA
                   a      TCCA tttgaattca
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
        G A        A      | | | | |     A
      A     T C T G       G T G G G     C
      G     | | + |                 T T
      G     A G G C
        C T        A     TTTAC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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