The detailed information of tRNA gene sequence


Sequence ID>A171001061
Genome IDCP001800
Search identical group
Phylum/ClassThermoproteota
SpeciesSaccharolobus solfataricus [CP001800]
Start position on genome 1106835
End posion on genome 1106761
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
atagcggctg
tRNA gene sequence 
GCTCGGGTAGCTCAGCCTGGAAGAGCGCCGGGCTGTGGACCCGGAAGTCCCGGGTTCAAA
TCCCGGCCCGAGCCCtt
Downstream region at tRNA end position 
cttttgatca
Secondary structure (Cloverleaf model)
>A171001061	His	GTG
                   g      CCtt cttttgatca
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G A A        G     AAGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.-

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