The detailed information of tRNA gene sequence


Sequence ID>A171001065
Genome IDCP001857
Search identical group
Phylum/ClassEuryarchaeota
SpeciesArchaeoglobus profundus DSM 5631 [CP001857]
Start position on genome 112468
End posion on genome 112541
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
taatcggtag
tRNA gene sequence 
GCGCGGGTAGTCTAGCCTGGTAGGACAACGCCCTTCCGAGGCGTTAGCCCGGGTTCAAAT
CCCGGCCCGCGCACtt
Downstream region at tRNA end position 
ctaacctttg
Secondary structure (Cloverleaf model)
>A171001065	Gly	TCC
                   g      ACtt ctaacctttg
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       T C T G       C C G G G     C
    T       + | | |                 T T
    G       G G A C
      G T A        A     TAGC
                    A - T
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.-

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