The detailed information of tRNA gene sequence


Sequence ID>A171001069
Genome IDCP001857
Search identical group
Phylum/ClassEuryarchaeota
SpeciesArchaeoglobus profundus DSM 5631 [CP001857]
Start position on genome 335784
End posion on genome 335867
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gatttttcga
tRNA gene sequence 
GCCGGGGTTGCAGAGTCCGGCACTGCGGGGGACTCGAGATCCCCTGCCCGAAAGGGTTCG
TGGGTTCAAATCCCACCCCCGGCGtag
Downstream region at tRNA end position 
agcggtcgtc
Secondary structure (Cloverleaf model)
>A171001069	Ser	CGA
                   a      Gtag agcggtcgtc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        T      | | | | |     A
    C       G A C G       G T G G G     C
    C       | | | |                 T T
    G       C T G C
      G C A        G     TGCCCGAAAGGGTTC
                    G - C
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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