The detailed information of tRNA gene sequence


Sequence ID>A171001076
Genome IDCP001857
Search identical group
Phylum/ClassEuryarchaeota
SpeciesArchaeoglobus profundus DSM 5631 [CP001857]
Start position on genome 830472
End posion on genome 830545
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
atatcatcaa
tRNA gene sequence 
GCCCGGGTAGCTCAGCCTGGGAGAGCGCGCGGCTGAAGACCGCGTAGTCCCCGGTTCAAA
TCCGGGTCCGGGCAtat
Downstream region at tRNA end position 
acaatctctt
Secondary structure (Cloverleaf model)
>A171001076	Phe	GAA
                   a      Atat acaatctctt
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G + T          T A
                    T     G G G C C     A
      C G A        A      | | | | |     A
    C       C T C G       C C C G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        G     TAGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.-

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