The detailed information of tRNA gene sequence


Sequence ID>A171001082
Genome IDCP001857
Search identical group
Phylum/ClassEuryarchaeota
SpeciesArchaeoglobus profundus DSM 5631 [CP001857]
Start position on genome 980705
End posion on genome 980781
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cctgccgtgt
tRNA gene sequence 
CCGCGGATAGCTCAGCTGGGTAGAGCGTCGGGCTGATAACCCGAAAGACGCGGGTTCAAA
TCCCGCTCCGCGAACCA
Downstream region at tRNA end position 
tcatcacggc
Secondary structure (Cloverleaf model)
>A171001082	Ile	GAT
                   t      ACCA tcatcacggc
                     C   A
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T          T A
                    T     C G C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      G T A        G     AAGAC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.-

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