The detailed information of tRNA gene sequence


Sequence ID>A171001094
Genome IDCP001857
Search identical group
Phylum/ClassEuryarchaeota
SpeciesArchaeoglobus profundus DSM 5631 [CP001857]
Start position on genome 1049888
End posion on genome 1049813
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gcaagcccaT
tRNA gene sequence 
GGGCTCGTAGCTCAGCCTGGTAGAGCGCCGCCTTTGCAAGGCGGAGGCCTCGGGTTCAAA
TCCCGACGAGTCCATta
Downstream region at tRNA end position 
ttacatgcac
Secondary structure (Cloverleaf model)
>A171001094	Ala	TGC
                   T      ATta ttacatgcac
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     A G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       T C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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