The detailed information of tRNA gene sequence


Sequence ID>A171001101
Genome IDCP001857
Search identical group
Phylum/ClassEuryarchaeota
SpeciesArchaeoglobus profundus DSM 5631 [CP001857]
Start position on genome 338698
End posion on genome 338626
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aggcaagata
tRNA gene sequence 
GGGCTCGTGGTCTAGGGGTTATGACGTCGCCCTTACGAGGCGAAGGTCCCCGGTTCGAAT
CCGGGCGAGCCCAtgc
Downstream region at tRNA end position 
caattccttt
Secondary structure (Cloverleaf model)
>A171001101	Val	TAC
                   a      Atgc caattccttt
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G G G C C     A
      G G A        G      | | | | |     G
    G       T C T G       C C C G G     C
    G         | | |                 T T
    T       T G A C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.-

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