The detailed information of tRNA gene sequence


Sequence ID>A171001159
Genome IDCP001868
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax mediterranei ATCC 33500 CGMCC 1.2087 [CP001868]
Start position on genome 522082
End posion on genome 522158
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctggtgtagT
tRNA gene sequence 
AGCGGGATGGGATAGCCAGGAGATTCCGCCGGGCTCATAACCCGGAGATCGGTAGTTCAA
ATCTACCTCCCGCTATga
Downstream region at tRNA end position 
ttttgccgac
Secondary structure (Cloverleaf model)
>A171001159	Met	CAT
                   T      ATga ttttgccgac
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C A T C     A
    C C G A        G      | | | | |     A
  A         T A G G       G G T A G     C
  G           | | |                 T T
  G         T T C C
    A G A          G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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