The detailed information of tRNA gene sequence


Sequence ID>A171001161
Genome IDCP001868
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax mediterranei ATCC 33500 CGMCC 1.2087 [CP001868]
Start position on genome 581208
End posion on genome 581293
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gacgatggaa
tRNA gene sequence 
GCCGAGGTAGCCTAGCCCGGCCAAGGCGGTAGATTCGAAATCTACTGTCCATTCGGACAC
GTGAGTTCAAATCTCACCCTCGGCGCtt
Downstream region at tRNA end position 
ctcagcgaac
Secondary structure (Cloverleaf model)
>A171001161	Ser	CGA
                   a      GCtt ctcagcgaac
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C T C     A
    C C G A        A      | | | | |     A
  C         T C C G       G T G A G     C
  G         | | | |                 T T
  G         A G G C
    C C A          G     TGTCCATTCGGACAC
                    G - C
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.-

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