The detailed information of tRNA gene sequence


Sequence ID>A171001175
Genome IDCP001868
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax mediterranei ATCC 33500 CGMCC 1.2087 [CP001868]
Start position on genome 2836430
End posion on genome 2836355
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gattaactgc
tRNA gene sequence 
GCCAAGGTGGCAGAGTTCGGCCTAACGCAGCGGCCTGCAGAGCCGCCCGCCGCCGGTTCA
AATCCGGCCCTTGGCTttc
Downstream region at tRNA end position 
ttcagttacg
Secondary structure (Cloverleaf model)
>A171001175	Cys	GCA
                   c      Tttc ttcagttacg
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C G G C C     A
    T T G A        G      | | | | |     A
  C         G A C G       G C C G G     C
  G             | |                 T T
  G         A C G C
    C C T A        A     CCGCC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.-

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