The detailed information of tRNA gene sequence


Sequence ID>A171001187
Genome IDCP001868
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax mediterranei ATCC 33500 CGMCC 1.2087 [CP001868]
Start position on genome 1828792
End posion on genome 1828709
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttcaatacgc
tRNA gene sequence 
GCGAGGGTAGCTAAGTCAGGAAAAAGCGGCGGACTCAAGATCCGCTCCCGTAGGGGTCCG
TGGGTTCAAATCCCTCCCCTCGCAtcg
Downstream region at tRNA end position 
cgtttttccg
Secondary structure (Cloverleaf model)
>A171001187	Leu	CAA
                   c      Atcg cgtttttccg
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        A      |   | | |     A
  A         A T C G       G T G G G     C
  G           | | |                 T T
  G         A A G C
    A A A          G     TCCCGTAGGGGTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.-

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