The detailed information of tRNA gene sequence


Sequence ID>A171001195
Genome IDCP001868
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax mediterranei ATCC 33500 CGMCC 1.2087 [CP001868]
Start position on genome 885992
End posion on genome 885920
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
agcccactgc
tRNA gene sequence 
GCCGGTGTAGCTCAGCTGGCAGAGCGATTCCTTCGTAAGGAATAGGCCGAGGGTTCAAAT
CCCTCCACCGGCTtca
Downstream region at tRNA end position 
cctgattcct
Secondary structure (Cloverleaf model)
>A171001195	Thr	CGT
                   c      Ttca cctgattcct
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGCC
                    A - T
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.-

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