The detailed information of tRNA gene sequence


Sequence ID>A171001200
Genome IDCP001868
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax mediterranei ATCC 33500 CGMCC 1.2087 [CP001868]
Start position on genome 396996
End posion on genome 396915
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgcgttgtaa
tRNA gene sequence 
GCCAGGATGGCCGAGCGGTAAGGCGCACGCCTGGAAAGCGTGTTCCCTCTGGGATCGGGG
GTTCAAATCCCTCTCCTGGCGCtt
Downstream region at tRNA end position 
cttccgaact
Secondary structure (Cloverleaf model)
>A171001200	Ser	GGA
                   a      GCtt cttccgaact
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
        G A        G      | + | | |     A
      C     G C C G       G G G G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TTCCCTCTGGGATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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