The detailed information of tRNA gene sequence


Sequence ID>A171001215
Genome IDCP001899
Search identical group
Phylum/ClassEuryarchaeota
SpeciesFerroglobus placidus DSM 10642 [CP001899]
Start position on genome 1175828
End posion on genome 1175901
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
attttagtga
tRNA gene sequence 
GCCGCCGTAGCTTAGCTGGTAGAGCGTCGGCCTGTTAAGCCGATGGTCGCAGGTTCGAAT
CCTGCCGGCGGCGCta
Downstream region at tRNA end position 
ttaattttgt
Secondary structure (Cloverleaf model)
>A171001215	Asn	GTT
                   a      GCta ttaattttgt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | | | |     G
    T       T T C G       G C A G G     C
    G       + | | |                 T T
    G       G A G C
      T A          G     TGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.-

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