The detailed information of tRNA gene sequence


Sequence ID>A171001217
Genome IDCP001899
Search identical group
Phylum/ClassEuryarchaeota
SpeciesFerroglobus placidus DSM 10642 [CP001899]
Start position on genome 1488987
End posion on genome 1489070
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atttactgct
tRNA gene sequence 
GCCGGGGTTGCAGAGAGGCACTGCGCCGGCCTGGAGAGCCGGTGCCCGTCAAGGGCTCCT
GGGTTCAAGTCCCAGCCCCGGCGCtt
Downstream region at tRNA end position 
gttctttgtt
Secondary structure (Cloverleaf model)
>A171001217	Ser	GGA
                   t      GCtt gttctttgtt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     G A C C C     A
        G A        T      | | | | |     A
      A     G A C G       C T G G G     C
      G     | | | |                 T T
      G     C T G C
        C A        G     TGCCCGTCAAGGGCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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