The detailed information of tRNA gene sequence


Sequence ID>A171001223
Genome IDCP001899
Search identical group
Phylum/ClassEuryarchaeota
SpeciesFerroglobus placidus DSM 10642 [CP001899]
Start position on genome 2162075
End posion on genome 2162148
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ccttcttcag
tRNA gene sequence 
GGGGCCGTAGGGTAGCCTGGTTATCCTCCCGGCTTTGGGAGCCGGTGACCCGAGTTCAAA
TCTCGGCGGCCCCAtgt
Downstream region at tRNA end position 
atttatatct
Secondary structure (Cloverleaf model)
>A171001223	Pro	TGG
                   g      Atgt atttatatct
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C T C     A
    C C G A        A      | | | | |     A
  T         T G G G       C C G A G     C
  G           | | +                 T T
  G         T C C T
    T T A          C     TGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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