The detailed information of tRNA gene sequence


Sequence ID>A171001225
Genome IDCP001899
Search identical group
Phylum/ClassEuryarchaeota
SpeciesFerroglobus placidus DSM 10642 [CP001899]
Start position on genome 2012252
End posion on genome 2012181
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ctactttcga
tRNA gene sequence 
GGGCTCGTAGCTCAGCGGCAGAGCGCCGCCTTCGCAAGGCGGAGGCCCCGGGTTCAAATC
CCGGCGAGTCCAtac
Downstream region at tRNA end position 
aattccactt
Secondary structure (Cloverleaf model)
>A171001225	Ala	CGC
                   a      Atac aattccactt
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G G C C C     A
        G A        A      | | | | |     A
      C     C T C G       C C G G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.-

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