The detailed information of tRNA gene sequence


Sequence ID>A171001253
Genome IDCP001901
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus sp. FS406-22 [CP001901]
Start position on genome 548759
End posion on genome 548846
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgcttttaga
tRNA gene sequence 
GCGGGGGTGGCCCAGCCTGGTACGGCGCGGGACTGCTAATCCCGTTGGGCAACGCCCAGC
CCGGGTTCAAGTCCCGGCCCCCGCGCCA
Downstream region at tRNA end position 
tacattaatg
Secondary structure (Cloverleaf model)
>A171001253	Ser	GCT
                   a      GCCA tacattaatg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     G G C C C     A
      C G A        G      | | | | |     A
    C       C C C G       C C G G G     C
    T         | | |                 T T
    G       C G G C
      G T A        G     TTGGGCAACGCCCAGC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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