The detailed information of tRNA gene sequence


Sequence ID>A171001279
Genome IDCP001901
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus sp. FS406-22 [CP001901]
Start position on genome 1016916
End posion on genome 1016829
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
cctattaagg
tRNA gene sequence 
GCGGGGGTCGCCAAGCCAGGTCAAAGGCGCCAGATTGAGGGTCTGGTCCCGTAGGGGTTC
GCGGGTTCAAATCCCGTCCCCCGCACCA
Downstream region at tRNA end position 
tttgttaagc
Secondary structure (Cloverleaf model)
>A171001279	Leu	GAG
                   g      ACCA tttgttaagc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G C C C     A
    C C G A        C      + | | | |     A
  A         A C C G       G C G G G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCCCGTAGGGGTTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.-

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