The detailed information of tRNA gene sequence


Sequence ID>A171001333
Genome IDCP001939
Search identical group
Phylum/ClassThermoproteota
SpeciesThermosphaera aggregans DSM 11486 [CP001939]
Start position on genome 1058980
End posion on genome 1059054
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ataaaaacag
tRNA gene sequence 
GCCGCCGTAGCTCAGCCTGGTGGAGCGCTGCCCTGGTAAGGCAGAGGTCCCGGGTTCGAA
TCCCGGCGGCGGCTCtt
Downstream region at tRNA end position 
acggagtttt
Secondary structure (Cloverleaf model)
>A171001333	Thr	GGT
                   g      TCtt acggagtttt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     G
    C       C T C G       C C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T G        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.-

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