The detailed information of tRNA gene sequence


Sequence ID>A171001337
Genome IDCP001939
Search identical group
Phylum/ClassThermoproteota
SpeciesThermosphaera aggregans DSM 11486 [CP001939]
Start position on genome 1208821
End posion on genome 1208894
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gggtttcaag
tRNA gene sequence 
GGGCCCGTAGCTCAGCCAGGTAGAGCGCCCGGCTCATAACCGGGTGGACCGGGGTTCAAA
TCCCCGCGGGCCCAtta
Downstream region at tRNA end position 
aaacaatgcc
Secondary structure (Cloverleaf model)
>A171001337	Met	CAT
                   g      Atta aaacaatgcc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
      C G A        A      | | | | |     A
    C       C T C G       C G G G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     TGGAC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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