The detailed information of tRNA gene sequence


Sequence ID>A171001342
Genome IDCP001939
Search identical group
Phylum/ClassThermoproteota
SpeciesThermosphaera aggregans DSM 11486 [CP001939]
Start position on genome 1175396
End posion on genome 1175321
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
taccttgaaa
tRNA gene sequence 
GGGCCCGTAGCCTAGCCTGGATAGGGCGCCGGCCTGCGGAGCCGGAGGACCCGGGTTCAA
ATCCCGGCGGGCCCGCag
Downstream region at tRNA end position 
tctccttcaa
Secondary structure (Cloverleaf model)
>A171001342	Arg	GCG
                   a      GCag tctccttcaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  T         T C C G       C C G G G     C
  G         + | | |                 T T
  G         G G G C
    A T A          G     AGGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.-

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