The detailed information of tRNA gene sequence


Sequence ID>A171001343
Genome IDCP001939
Search identical group
Phylum/ClassThermoproteota
SpeciesThermosphaera aggregans DSM 11486 [CP001939]
Start position on genome 974870
End posion on genome 974795
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
aaccttgaaa
tRNA gene sequence 
GGGCCCGTTGCCTAGCCAGGATCAGGGCGCCGGCCTTCGGAGCCGGAGGCCCCGGGTTCA
AATCCCGGCGGGCCCGtgt
Downstream region at tRNA end position 
tttctttaaa
Secondary structure (Cloverleaf model)
>A171001343	Arg	TCG
                   a      Gtgt tttctttaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        T      | | | | |     A
  A         T C C G       C C G G G     C
  G         + | | |                 T T
  G         G G G C
    A T C A        G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.-

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