The detailed information of tRNA gene sequence


Sequence ID>A171001344
Genome IDCP001939
Search identical group
Phylum/ClassThermoproteota
SpeciesThermosphaera aggregans DSM 11486 [CP001939]
Start position on genome 967652
End posion on genome 967578
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gattgttaga
tRNA gene sequence 
GGGGCCGTAGTCTAGCCTGGCTAGGATGCGGGGCTTGGGCCCCCGTGACCCGGGGTTCAA
ATCCCCGCGGCCCCAttc
Downstream region at tRNA end position 
aaagccttga
Secondary structure (Cloverleaf model)
>A171001344	Pro	TGG
                   a      Attc aaagccttga
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    C C G A        A      | | | | |     A
  T         T C T G       C G G G G     C
  G         + | | +                 T T
  G         G G A T
    C T A          G     TGACC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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