The detailed information of tRNA gene sequence


Sequence ID>A171001360
Genome IDCP001941
Search identical group
Phylum/ClassUnclassified
SpeciesAciduliprofundum boonei T469 [CP001941]
Start position on genome 1143988
End posion on genome 1144063
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
caaatatgat
tRNA gene sequence 
GCTCCGGTGGTGTAGCACGGCCAAGCATTAGGGGCTCTCAACCCCTCGACCCGGGTTCAA
ATCCCGGCCGGAGCACta
Downstream region at tRNA end position 
agaagcccct
Secondary structure (Cloverleaf model)
>A171001360	Glu	CTC
                   t      ACta agaagcccct
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    A C G A        G      | | | | |     A
  C         T G T G       C C G G G     C
  G         + | | +                 T T
  G         G C A T
    C C A A        T     CGAC
                    A - T
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.-

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