The detailed information of tRNA gene sequence


Sequence ID>A171001370
Genome IDCP001941
Search identical group
Phylum/ClassUnclassified
SpeciesAciduliprofundum boonei T469 [CP001941]
Start position on genome 1028683
End posion on genome 1028608
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ttagggaatt
tRNA gene sequence 
GGGCGCGTGGCCTAGCATGGATAGGGCGCTGGCCTTCTAAGTCAGTGATCGCGGGTTCAA
ATCCCGCCGCGCCCGCtg
Downstream region at tRNA end position 
ggtaatcttt
Secondary structure (Cloverleaf model)
>A171001370	Arg	TCT
                   t      GCtg ggtaatcttt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C          T A
                    T     C G C C C     A
    A C G A        G      | | | | |     A
  T         T C C G       G C G G G     C
  G         + | | |                 T T
  G         G G G C
    A T A          G     TGATC
                    C - G
                    T - A
                    G - C
                    G + T
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.-

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