The detailed information of tRNA gene sequence


Sequence ID>A171001373
Genome IDCP001941
Search identical group
Phylum/ClassUnclassified
SpeciesAciduliprofundum boonei T469 [CP001941]
Start position on genome 902836
End posion on genome 902762
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aatccatcaa
tRNA gene sequence 
GGGCCCGTGGTCTAGGTGGTTATGACGTCACCCTGACACGGTGGAGGTCCCCGGTTCGAA
TCCGGGCGGGCCCACtg
Downstream region at tRNA end position 
gaagggacac
Secondary structure (Cloverleaf model)
>A171001373	Val	GAC
                   a      ACtg gaagggacac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G G C C     A
      G G A        G      | | | | |     G
    T       T C T G       C C C G G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.-

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