The detailed information of tRNA gene sequence


Sequence ID>A171001374
Genome IDCP001941
Search identical group
Phylum/ClassUnclassified
SpeciesAciduliprofundum boonei T469 [CP001941]
Start position on genome 860950
End posion on genome 860875
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ctccagctaT
tRNA gene sequence 
GGGCCGGTAGATCAGCCCGGAAGATCGCTGCCCTTGCAAGGCAGAGGCCGCGGGTTCAAA
TCCCGCCCGGTCCATta
Downstream region at tRNA end position 
agcccctttc
Secondary structure (Cloverleaf model)
>A171001374	Ala	TGC
                   T      ATta agcccctttc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | | | |     A
    C       C T A G       G C G G G     C
    C       | | | |                 T T
    G       G A T C
      G A A        G     AGGCC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.-

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