The detailed information of tRNA gene sequence


Sequence ID>A171001378
Genome IDCP001941
Search identical group
Phylum/ClassUnclassified
SpeciesAciduliprofundum boonei T469 [CP001941]
Start position on genome 454065
End posion on genome 453991
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gccaccacaa
tRNA gene sequence 
GGGCCGGTAGATCAGCCCGGTAGATCGCCACATTCGCAATGTGGAGGCCGCGGGTTCGAG
TCCCGCCCGGTCCACtc
Downstream region at tRNA end position 
accccgttaa
Secondary structure (Cloverleaf model)
>A171001378	Ala	CGC
                   a      ACtc accccgttaa
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     C G C C C     A
      C G A        A      | | | | |     G
    C       C T A G       G C G G G     C
    C       | | | |                 T T
    G       G A T C
      G T A        G     AGGCC
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.-

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