The detailed information of tRNA gene sequence


Sequence ID>A171001380
Genome IDCP001956
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax volcanii DS2 [CP001956]
Start position on genome 11661
End posion on genome 11733
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
actgatgcga
tRNA gene sequence 
AGTCCCATGGGGTAGTGGCCAATCCTGTTGCCTTCTGGGGGCAACGACCCAGGTTCGAAT
CCTGGTGGGACTAttt
Downstream region at tRNA end position 
ctccgattct
Secondary structure (Cloverleaf model)
>A171001380	Gln	CTG
                   a      Attt ctccgattct
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G G T C C     A
      T G A        G      | | | | |     G
    G       T G G G       C C A G G     C
    G         | | +                 T T
    C       T C C T
      C A A        G     CGAC
                    T - A
                    T - A
                    G - C
                    C - G
                    C - G
                  T       G
                  T       G
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.-

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