The detailed information of tRNA gene sequence


Sequence ID>A171001415
Genome IDCP001956
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax volcanii DS2 [CP001956]
Start position on genome 1307561
End posion on genome 1307487
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
aagtcatgta
tRNA gene sequence 
GGGCGCTTAGCTCAGTCTGGACAGAGTGCTTGGCTTCGGACCAAGTTGCCACGGGTTCAA
ATCCTGTAGCGCCCAtcc
Downstream region at tRNA end position 
aaaatttagg
Secondary structure (Cloverleaf model)
>A171001415	Arg	TCG
                   a      Atcc aaaatttagg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          T A
                    T     T G T C C     A
    C T G A        A      | | + | |     A
  T         C T C G       A C G G G     C
  G         | | | +                 T T
  G         G A G T
    A C A          G     TTGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.-

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