The detailed information of tRNA gene sequence


Sequence ID>A171001425
Genome IDCP001956
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloferax volcanii DS2 [CP001956]
Start position on genome 311725
End posion on genome 311653
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acttcagtaa
tRNA gene sequence 
GCCCGGGTGGTGTAGTGGCCCATCATACGACCCTGTCACGGTCGTGACGCGGGTTCAAAT
CCCGCCTCGGGCGtac
Downstream region at tRNA end position 
ttttcgatga
Secondary structure (Cloverleaf model)
>A171001425	Asp	GTC
                   a      Gtac ttttcgatga
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G + T
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     A
    G       T G T G       G C G G G     C
    G         | | +                 T T
    C       T C A T
      C C A        A     TGAC
                    C - G
                    G - C
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.-

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