The detailed information of tRNA gene sequence


Sequence ID>A171001477
Genome IDCP002009
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus infernus ME [CP002009]
Start position on genome 644691
End posion on genome 644765
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
taattcccga
tRNA gene sequence 
GGGCCCATAGTCTAGCTGGCTATGACGCCGCCCTTACAAGGCGGAGGTCGCCGGTTCGAA
TCCGGCTGGGCCCACta
Downstream region at tRNA end position 
ttttttactt
Secondary structure (Cloverleaf model)
>A171001477	Val	TAC
                   a      ACta ttttttactt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C G G C C     A
      C G A        A      | | | | |     G
    T       T C T G       G C C G G     C
    G         | | |                 T T
    G       T G A C
      C T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.-

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