The detailed information of tRNA gene sequence


Sequence ID>A171001485
Genome IDCP002009
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus infernus ME [CP002009]
Start position on genome 1252689
End posion on genome 1252763
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
aaccttaagt
tRNA gene sequence 
GGGCCCGTAGCTCAGCCTGGCAGAGCGCCTGGCTTTTAACCAGGTGGTCGGGGGTTCAAA
TCCCCTCGGGCCCGCtt
Downstream region at tRNA end position 
ggtacggcgg
Secondary structure (Cloverleaf model)
>A171001485	Lys	TTT
                   t      GCtt ggtacggcgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C C C C     A
      C G A        A      + | | | |     A
    C       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        G     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.-

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