The detailed information of tRNA gene sequence


Sequence ID>A171001488
Genome IDCP002009
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus infernus ME [CP002009]
Start position on genome 1300116
End posion on genome 1300029
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccctttttaT
tRNA gene sequence 
GCGGGGGTGGCCCAGCCTGGTACGGCGCGGGACTGCTAATCCCGTTGGGCATAGCCCTAC
CCGGGTTCAAATCCCGGCCCCCGCGTCa
Downstream region at tRNA end position 
ttaagtttat
Secondary structure (Cloverleaf model)
>A171001488	Ser	GCT
                   T      GTCa ttaagtttat
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        G      | | | | |     A
    C       C C C G       C C G G G     C
    T         | | |                 T T
    G       C G G C
      G T A        G     TTGGGCATAGCCCTAC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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