The detailed information of tRNA gene sequence


Sequence ID>A171001503
Genome IDCP002009
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus infernus ME [CP002009]
Start position on genome 627619
End posion on genome 627543
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ctttttccaa
tRNA gene sequence 
GGGGCCGTGGGGTAGCCTGGTTATCCTGTGCGCTTGGGGGGCGTGCGACCCGGGTTCAAG
TCCCGGCGGCCCCACCA
Downstream region at tRNA end position 
attttttatt
Secondary structure (Cloverleaf model)
>A171001503	Pro	GGG
                   a      ACCA attttttatt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T G
                    T     G G C C C     A
      C G A        G      | | | | |     A
    C       T G G G       C C G G G     C
    T       | + | |                 T T
    G       A T C C
      G T T        T     GCGAC
                    G + T
                    T + G
                    G - C
                    C - G
                    G   G
                  C       G
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.-

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