The detailed information of tRNA gene sequence


Sequence ID>A171001508
Genome IDCP002009
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocaldococcus infernus ME [CP002009]
Start position on genome 25535
End posion on genome 25458
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
tatttttcgt
tRNA gene sequence 
GCCTCGGTAGCTCAGCCTGGTCAGAGCGCCTGCTTGGTAAGCAGGAGGTCGCGGGTTCAA
ACCCCGCCCGAGGCTCCA
Downstream region at tRNA end position 
tttttatgca
Secondary structure (Cloverleaf model)
>A171001508	Thr	GGT
                   t      TCCA tttttatgca
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          C A
                    T     C G C C C     A
    C C G A        A      | | | | |     A
  T         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    T C A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.-

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