The detailed information of tRNA gene sequence


Sequence ID>A171001514
Genome IDCP002051
Search identical group
Phylum/ClassThermoproteota
SpeciesStaphylothermus hellenicus DSM 12710 [CP002051]
Start position on genome 1566228
End posion on genome 1566140
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taattagaat
tRNA gene sequence 
GCCGGGGTGCCCGAGCGGTCTAAGGGGCTGGCCTGGAGAGCCAGTGCCCCATATGGGGCG
CGCGGGTTCGAATCCCGCCCCCGGCGCCA
Downstream region at tRNA end position 
cttctttata
Secondary structure (Cloverleaf model)
>A171001514	Ser	GGA
                   t      GCCA cttctttata
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        G      | | | | |     G
    G       G C C C       G C G G G     C
    G         | | |                 T T
    T       A G G G
      C T A        G     TGCCCCATATGGGGCGC
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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