The detailed information of tRNA gene sequence


Sequence ID>A171001564
Genome IDCP002062
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalalkalicoccus jeotgali B3 [CP002062]
Start position on genome 304676
End posion on genome 304757
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtcggtgtca
tRNA gene sequence 
GCCGGGATGGCCGAACGGTAAAGCGCACGCCTGGAAAGCGTGTTCCCGTATGGGATTCTG
GGTTCAAATCCCAGTCCCGGCGtct
Downstream region at tRNA end position 
tttcgaatta
Secondary structure (Cloverleaf model)
>A171001564	Ser	GGA
                   a      Gtct tttcgaatta
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
        A A        G      | | | | |     A
      C     G C C G       C T G G G     C
      G         | |                 T T
      G     A A G C
        T A        G     TTCCCGTATGGGATT
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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